Publications

Found 82 results
Author Title [ Type(Asc)] Year
Filters: Author is Eran Halperin  [Clear All Filters]
Journal Article
Zaitlen, N., Pasaniuc B., Gur T., Ziv E., & Halperin E. (2010).  Leveraging Genetic Variability Across Populations for the Identification of Causal Variants. The American Journal of Human Genetics. 86(1), 23-33.
Sankararaman, S., Sridhar S., Kimmel G., & Halperin E. (2008).  LAMP: Local Ancestry in adMixed Populations. American Journal of Human Genetics. 82(2), 290-303.
Baran, Y., & Halperin E. (2012).  Joint Analysis of Multiple Metagenomic Samples. PLoS Computational Biology. 8(2), 
Wang, J., Geesman G. J., Hostikka S. Liisa, Atallah M., Blackwell B., Lee E., et al. (2011).  Inhibition of Activated Pericentromeric SINE/Alu Repeat Transcription in Senescent Human Adult Stem Cells Reinstates Self-Renewal. Cell Cycle. 10(17), 3016-3030.
Zaitlen, N., Kang H. Min, Feolo M. L., Sherry S. T., Halperin E., & Eskin E. (2005).  Inference and Analysis of Haplotypes from Combined Genotyping Studies Deposited in dbSNP. Genome Research. 15(11), 1594-1600.
Davidovich, O.., Kimmel G., Halperin E., & Shamir R. (2009).  Increasing the Power of Association Studies by Imputation-Based Sparse Tag SNP Selection. Communications in Information and Systems. 9(3), 269-282.
Gymrek, M., McGuire A. L., Golan D., Halperin E., & Erlich Y. (2013).  Identifying Personal Genomes by Surname Inference. Science. 339(6117), 321-324.
Shem-Tov, D., & Halperin E. (2014).  Historical Pedigree Reconstruction from Extant Populations Using PArtitioning of RElatives (PREPARE). PLoS Computational Biology. 10(6), 
Halperin, E., & Eskin E. (2004).  Haplotype Reconstruction from Genotype Data Using Imperfect Phylogeny. Bioinformatics.
Kirkpatrick, B., Halperin E., & Karp R. M. (2010).  Haplotype Inference in Complex Pedigrees. Journal of Computational Biology. 17(3), 269-280.
Kirkpatrick, B., C. Armendariz S., Karp R. M., & Halperin E. (2007).  HAPLOPOOL: Improving Haplotype Frequency Estimation Through DNA Pools and Phylogenetic Modeling. Bioinformatics. 23(22), 3048-3055.
He, D., Zaitlen N., Pasaniuc B., Eskin E., & Halperin E. (2011).  Genotyping Common and Rare Variation Using Overlapping Pool Sequencing. BMC Informatics. 12,
Kovacs, A.., Ben-Jacob N.., Tayem H.., Halperin E., Iraqi F.. A., & Gophna U.. (2011).  Genotype Is a Stronger Determinant than Sex of the Mouse Gut Microbiota. Microbial Ecology. 61(2), 423-428.
Sankararaman, S., Obozinski G., Jordan M. I., & Halperin E. (2009).  Genomic Privacy and Limits of Individual Detection in a Pool. Nature Genetics. 41(9), 965-967.
Conde, L., Halperin E., Akers N.. K., Brown K. M., Smedby K.. E., & Rothman N.. (2010).  Genome-Wide Association Study of Follicular Lymphoma Identifies a Risk Locus at 6p21.32. Nature Genetics. 42(8), 661-664.
Skibola, C. F., Bracci P. M., Halperin E., Conde L., Craig D. W., Agana L., et al. (2009).  Genetic Variants at 6p21.33 Are Associated with Susceptibility to Follicular Lymphoma. Nature Genetics. 41(8), 873-875.
Pasaniuc, B., Avinery R.., Gur T., Skibola C. F., Bracci P. M., & Halperin E. (2010).  A Generic Coalescent-Based Framework for the Selection of a Reference Panel for Imputation. Genetic Epidemiology. 34(8), 773-782.
Baran, Y., Pasaniuc B., Sankararaman S., Torgerson D. G., Gignoux C., Eng C., et al. (2012).  Fast and Accurate Inference of Local Ancestry in Latino Populations. Bioinformatics. 28(10), 1359-1367.
Sankararaman, S., Sridhar S., Kimmel G., & Halperin E. (2008).  Estimating Local Ancestry in Admixed Populations. The American Journal of Human Genetics. 82(2), 290-303.
Arkin, Y'ara., Rahmani E., Kleber M. E., Laaksonen R., März W., & Halperin E. (2014).  EPIQ—Efficient Detection of SNP–SNP Epistatic Interactions for Quantitative Traits. Bioinformatics. 30(12), i19-i25.
Eskin, E., Halperin E., & Karp R. M. (2003).  Efficient Reconstruction of Haplotype Structure Via Perfect Phylogeny. Journal of Bioinformatics and Computational Biology. 1(1), 1-20.
Gopalacharyulu, P. V., Velagapudi V.. R., Lindfors E., Halperin E., & Orešič M. (2009).  Dynamic Network Topology Changes in Functional Modules Predict Responses to Oxidative Stress in Yeast. Molecular BioSystems. 5(3), 276-287.
Lindfors, E., Gopalacharyulu P. V., Halperin E., & Orešič M. (2009).  Detection of Molecular Paths Associated with Insulitis and Type 1 Diabetes in Non-Obese Diabetic Mouse. PLoS ONE. 4(10), 
Preuss, M., König I. R., Thompson J. R., Erdmann J., Absher D., Assimes T. L., et al. (2010).  Design of the Coronary Artery Disease Genome-Wide Replication and Meta-Analysis (CARDIoGRAM) Study--A Genome-Wide Association Meta-Analysis Involving More than 22,000 Cases and 60,000 Controls. Circulation: Cardiovascular Genetics. 3, 475-483.
Marchini, J., Cutler D., Patterson N., Stephens M., Eskin E., Halperin E., et al. (2006).  A Comparison of Phasing Algorithms for Trios and Unrelated Individuals. American Journal of Human Genetics. 78(3), 437-450.

Pages