Publications

Found 238 results
Author Title Type [ Year(Desc)]
Filters: Author is Richard M. Karp  [Clear All Filters]
2004
Sharan, R., Ideker T. E., Kelley B. P., Shamir R., & Karp R. M. (2004).  Identification of Protein Complexes by Comparative Analysis of Yeast and Bacterial Protein Interaction Data. Proceedings of the 8th Annual International Conference on Research in Computational Molecular Biology (RECOMB'04). 282-289.
Sharan, R., Ideker T. E., Kelley B. P., Shamir R., & Karp R. M. (2004).  Identification of Protein Complexes by Comparative Analysis of Yeast and Bacterial Protein Interaction Data. Proceedings of RECOMB 2004. 282-289.
Sharan, R., Ideker T. E., Kelley B. P., Shamir R., & Karp R. M. (2004).  Identification of Protein Complexes by Comparative Analysis of Yeast and Bacterial Protein Interaction Data. Proceedings of the 8th Annual International Conference on Research in Computational Molecular Biology (RECOMB'04). 282-289.
P. Godfrey, B., Karp R. M., Lakshminarayanan K., Surana S., & Stoica I. (2004).  Load Balancing in Dynamic Structured P2P Systems. Proceedings of INFOCOMM.
P. Godfrey, B., Karp R. M., Lakshminarayanan K., Surana S., & Stoica I. (2004).  Load Balancing in Dynamic Structured P2P Systems. Proceedings of INFOCOMM.
Halperin, E., & Karp R. M. (2004).  The Minimum-Entropy Set Cover Problem. Proceedings of ICALP.
Xing, E. P., & Karp R. M. (2004).  MotifPrototyper: A Bayesian Profile Model for Motif Families. Proceedings of the National Academy of Sciences of the United States of America. 101(29), 10523-10528.
Halperin, E., & Karp R. M. (2004).  Perfect Phylogeny and Haplotype Assignment. Proceedings of RECOMB.
Gat-Viks, I., Shamir R., Karp R. M., & Sharan R. (2004).  Reconstructing Chain Functions in Genetic Networks. Proceedings of the Ninth Pacific Symposium on Biocomputing (PSB'04). 498-509.
Chandrayana, K.., Karp R. M., Roughan M.., Sen S.., & Zhang Y. (2004).  Search Strategies in Inter-Domain Traffic Engineering.
Ben-Dor, A., Hartman T., Karp R. M., Schwikowski B., Sharan R., & Yakhini Z. (2004).  Towards Optimally Multiplexed Applications of Universal Arrays. Journal of Computational Biology. 11, 477-493.
2005
Sharan, R., Sutharan S., Kelley R. M., Kuhn T., McCuine S., Sittler T., et al. (2005).  Conserved Patterns of Protein Interaction in Multiple Species. Proceedings of National Academy of Science. 102(6), 1974-1979.
Scott, J., Ideker T. E., Karp R. M., & Sharan R. (2005).  Efficient Algorithms for Detecting Signaling Pathways in Protein Interaction Networks. Proceedings of the 9th Annual International Conference on Research in Computational Molecular Biology (RECOMB'05). 133-144.
Sharan, R., Ideker T. E., Kelley B. P., Shamir R., & Karp R. M. (2005).  Identification of Protein Complexes by Comparative Analysis of Yeast and Bacterial Protein Interaction Data. Journal of Computational Biology. 12(6), 835-846.
Halperin, E., & Karp R. M. (2005).  The Minimum-Entropy Set Cover Problem. Theoretical Computer Science. 348(2), 240-250.
Karp, R. M., Nierhoff T., & Tantau T. (2005).  Optimal Flow Distribution Among Multiple Channels with Unknown Capacities. Proceedings of the Second Brazilian Symposium of Graphs, Algorithms, and Combinatorics (GRACO 2005). 225-231.
Karp, R. M. (2005).  Optimization Problems Related to Internet Congestion Control.
Adler, I., Ahn H-S., Karp R. M., & Ross S. M. (2005).  A Probabilistic Model for the Survivability of Cells. Journal of Applied Probability. 42(4), 919-931.
Karp, R. M. (2005).  Report of the SIGACT Committee on funding for Theoretical Computer Science.
2007
Popa, L., Rostami A.., Karp R. M., Papadimitriou C. H., & Stoica I. (2007).  Balancing the Traffic Load in Wireless Networks with Curveball Routing. Proceedings of the 8th ACM International Symposium on Mobile Ad Hoc Networking and Computing (MobiHoc 2007).
Narayanan, M.., & Karp R. M. (2007).  Comparing Protein Interaction Networks via a Graph Match-and-Split Algorithm. Journal of Computational Biology. 14(7), 892-907.

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